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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs1036839 chr18:67182449 A/G POLI chr18:51795774-51847636:+ -0.5 -6.09 2.82E-9 Box Plot
BLCA rs1036839 chr18:67182449 A/G PQLC1 chr18:77662420-77711664:- -0.63 -6.72 6.8E-11 Box Plot
BLCA rs1036839 chr18:67182449 A/G SMAD2 chr18:45335328-45457517:- -0.71 -6.28 9.22E-10 Box Plot
BLCA rs1036839 chr18:67182449 A/G SMAD4 chr18:48554764-48611415:+ -0.69 -6.66 9.43E-11 Box Plot
BLCA rs1036839 chr18:67182449 A/G TXNL1 chr18:54264439-54318831:- -0.91 -7.98 1.7E-14 Box Plot
BLCA rs1036839 chr18:67182449 A/G VPS4B chr18:61056423-61089716:- -0.78 -8.75 6.78E-17 Box Plot
BLCA rs1036839 chr18:67182449 A/G ZADH2 chr18:72907063-72921303:- -0.68 -6.12 2.35E-9 Box Plot
BLCA rs1036839 chr18:67182449 A/G ZNF24 chr18:32912176-32925446:- -0.64 -6.37 5.43E-10 Box Plot
BLCA rs1038031 chr8:14021570 C/T CNOT7 chr8:17082473-17104387:- 0.81 6.34 6.6E-10 Box Plot
BLCA rs1038031 chr8:14021570 C/T POLR3D chr8:22102617-22112113:+ 0.77 6.3 8.05E-10 Box Plot
BLCA rs1038031 chr8:14021570 C/T VPS37A chr8:17104080-17159936:+ 0.79 6.33 6.78E-10 Box Plot
BLCA rs10403214 chr19:45617786 G/A MT4 chr16:56598961-56602869:+ 0.24 6.02 4.01E-9 Box Plot
BLCA rs1040810 chr14:39758196 G/A LOC647288 chr13:75811890-75814517:- 0.41 7.14 4.63E-12 Box Plot
BLCA rs10434669 chr5:176612831 G/A LOC388955 chr2:63849182-63850159:- -0.57 -11.91 4.85E-28 Box Plot
BLCA rs10438289 chr15:63895150 G/C VCX chrX:7810303-7812184:+ 0.34 6.08 2.88E-9 Box Plot